EnhancerDB
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  3. rs558820898[chr17:63035715]
Enhancers that have rs558820898[chr17:63035715]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 63029405 63049335 enh4533
Skin (Keratinocyte) Prostate (PC-3) Large Intestine Blood (T-cell) Esophagus Liver Blood (OCI-LY7) Blood (GM12878) Muscle (A673) Thyroid Peripheral Blood (MM.1S) Adrenal Blood (Karpas-422) Lung (PC-9) Uterus Thymus Stomach
chr17 63035715 63036037 vista25549
VISTA
Transcript factors that have rs558820898[chr17:63035715]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 63034963 63035918 TCF7L2 GTRD no Colon (HCT116) 108283349
chr17 63035030 63036027 ZBTB33 GTRD no Brain (SK-N-SH) 108283350
chr17 63035036 63036327 ZBTB33 GTRD no Brain (SK-N-SH) 108283351
chr17 63035049 63036118 ZBTB33 GTRD no Brain (SK-N-SH) 108283352
chr17 63035064 63035824 ZBTB33 GTRD no Brain (SK-N-SH) 108283353
chr17 63035070 63036153 ZBTB33 GTRD no Brain (SK-N-SH) 108283354
chr17 63035079 63035825 ZBTB33 GTRD no Brain (SK-N-SH) 108283355
chr17 63035090 63036133 ZBTB33 GTRD no Brain (SK-N-SH) 108283356
chr17 63035108 63036649 ZBTB33 GTRD no Lung (A549) 108283357
chr17 63035132 63035807 ZBTB33 GTRD no Brain (SK-N-SH) 108283358
chr17 63035171 63035736 TCF7L2 GTRD no Colon (HCT116) 108283359
chr17 63035329 63035792 ZBTB33 GTRD no Lung (A549) 108283360
chr17 63035472 63035736 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21781034
chr17 63035472 63035736 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108283361
chr17 63035699 63036695 ZBTB33 GTRD no Lung (A549) 108283362
chr17 63035706 63035718 TEAD1 JASPAR yes 21275436
chr17 63035706 63035718 TEAD1 JASPAR yes 55342439
chr17 63035708 63035729 ZNF263 JASPAR yes 21275437
chr17 63035708 63035729 ZNF263 JASPAR yes 55342440
chr17 63035713 63035723 MZF1 JASPAR yes 21275438
chr17 63035713 63035723 MZF1 JASPAR yes 55342441
Genes associated with rs558820898[chr17:63035715], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More