EnhancerDB
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  3. rs55883933[chr1:151889447]
Enhancers that have rs55883933[chr1:151889447]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 151885865 151921875 enh624
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Lung Heart
Transcript factors that have rs55883933[chr1:151889447]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 151888610 151889724 ZNF143 GTRD no Epithelial (MCF-7) 21337997
chr1 151888681 151889566 ZNF274 GTRD no Bone Marrow (K562) 21337998
chr1 151888719 151889704 ZNF143 GTRD no Epithelial (MCF-7) 21337999
chr1 151888746 151889639 ZNF274 GTRD no Blood (GM12878) 21338000
chr1 151888763 151889529 ZNF274 GTRD no Bone Marrow (K562) 21338002
chr1 151888783 151889728 ZNF274 GTRD no Cervix (HeLa-S3) 21338003
chr1 151888816 151889525 ZNF274 GTRD no Blood (GM12878) 21338004
chr1 151888829 151889511 ZNF274 GTRD no Blood (GM12878) 21338005
chr1 151888864 151889577 ZNF143 GTRD no Epithelial (MCF-7) 21338007
chr1 151888886 151889624 ZNF143 GTRD no Epithelial (MCF-7) 21338010
chr1 151888924 151889572 ZNF274 GTRD no Cervix (HeLa-S3) 21338015
chr1 151889032 151889521 ZNF274 GTRD no Bone Marrow (K562) 21338019
chr1 151889045 151889801 ZNF143 GTRD no Epithelial (MCF-7) 21338021
chr1 151889057 151889996 ZNF143 GTRD no Epithelial (MCF-7) 21338023
chr1 151889097 151889840 ZNF143 GTRD no Epithelial (MCF-7) 21338024
chr1 151889268 151889793 ZNF143 GTRD no Epithelial (MCF-7) 21338025
chr1 151889276 151889745 ZNF143 GTRD no Epithelial (MCF-7) 21338026
chr1 151889436 151889760 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21338027
Genes associated with rs55883933[chr1:151889447], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More