EnhancerDB
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  3. rs558858404[chr9:34190635]
Enhancers that have rs558858404[chr9:34190635]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr9 34182234 34195995 enh10715
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs558858404[chr9:34190635]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr9 34190615 34190636 IRF1 JASPAR yes 83831363
chr9 34190617 34190638 IRF1 JASPAR yes 83831364
chr9 34190621 34190642 IRF1 JASPAR yes 83831365
chr9 34190623 34190638 PRDM1 JASPAR yes 83831366
chr9 34190623 34190638 STAT2 JASPAR yes 83831367
chr9 34190624 34190638 SPIC JASPAR yes 83831368
chr9 34190624 34190638 STAT1 JASPAR yes 83831369
chr9 34190625 34190646 IRF1 JASPAR yes 83831370
chr9 34190626 34190641 FOXP1 JASPAR yes 83831371
chr9 34190626 34190647 IRF1 JASPAR yes 83831372
chr9 34190627 34190648 IRF1 JASPAR yes 83831373
chr9 34190628 34190643 FOXP1 JASPAR yes 83831374
chr9 34190628 34190649 IRF1 JASPAR yes 83831375
chr9 34190630 34190645 FOXP1 JASPAR yes 83831376
chr9 34190631 34190646 FOXP1 JASPAR yes 83831377
chr9 34190632 34190647 FOXP1 JASPAR yes 83831378
chr9 34190633 34190648 FOXP1 JASPAR yes 83831379
chr9 34190634 34190649 FOXP1 JASPAR yes 83831380
chr9 34190635 34190650 FOXP1 JASPAR yes 83831381
Genes associated with rs558858404[chr9:34190635], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More