EnhancerDB
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  3. rs558894392[chr18:57540120]
Enhancers that have rs558894392[chr18:57540120]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr18 57537325 57555285 enh17763
Bone Marrow (K562) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Blood (GM12878) Muscle (A673) Placenta Colon (HCT116) Uterus Peripheral Blood (MM.1S) Lung (PC-9) Muscle (Myoblast) Neural Stem Cells (H9) Stomach
Transcript factors that have rs558894392[chr18:57540120]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr18 57540099 57540120 IRF1 JASPAR yes 111059214
chr18 57540105 57540126 IRF1 JASPAR yes 111059215
chr18 57540107 57540122 STAT2 JASPAR yes 111059216
chr18 57540108 57540122 STAT1 JASPAR yes 111059217
chr18 57540109 57540130 IRF1 JASPAR yes 111059218
chr18 57540110 57540125 FOXP1 JASPAR yes 111059219
chr18 57540110 57540131 IRF1 JASPAR yes 111059220
chr18 57540114 57540135 IRF1 JASPAR yes 111059221
chr18 57540115 57540130 FOXP1 JASPAR yes 111059222
chr18 57540115 57540136 IRF1 JASPAR yes 111059223
chr18 57540117 57540132 FOXP1 JASPAR yes 111059224
chr18 57540119 57540134 FOXP1 JASPAR yes 111059225
chr18 57540120 57540140 RREB1 JASPAR yes 111059226
Genes associated with rs558894392[chr18:57540120], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More