EnhancerDB
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  3. rs558897775[chr1:227007443]
Enhancers that have rs558897775[chr1:227007443]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 226990625 227018206 enh975
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs558897775[chr1:227007443]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 227007437 227007453 POU4F2 JASPAR yes 35848078
chr1 227007439 227007453 POU4F1 JASPAR yes 35848079
chr1 227007442 227007449 NKX3-1 JASPAR yes 35848080
Genes associated with rs558897775[chr1:227007443], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More