EnhancerDB
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  3. rs558924392[chr16:89407246]
Enhancers that have rs558924392[chr16:89407246]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 89371847 89409975 enh16905
Bone Marrow (K562) Liver Colon (HCT116) Adrenal Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs558924392[chr16:89407246]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 89406065 89408596 ZNF274 GTRD no Blood (GM12878) 21738286
chr16 89406065 89408596 ZNF274 GTRD no Blood (GM12878) 108225747
chr16 89406212 89407246 TCF7L2 GTRD no Colon (HCT116) 21738292
chr16 89406212 89407246 TCF7L2 GTRD no Colon (HCT116) 108225753
chr16 89407243 89407248 TFAP2A TRANSFAC yes 12333582
chr16 89407243 89407249 MZF1 JASPAR yes 12333583
Genes associated with rs558924392[chr16:89407246], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More