EnhancerDB
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  3. rs558949578[chr17:38673400]
Enhancers that have rs558949578[chr17:38673400]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 38663309 38720551 enh17141
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs558949578[chr17:38673400]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 38671043 38673614 ZNF274 GTRD no Bone Marrow (K562) 21754346
chr17 38671193 38673444 ZNF274 GTRD no Liver (HepG2) 21754351
chr17 38671193 38677697 ZNF274 GTRD no Liver (HepG2) 21754352
chr17 38671193 38677697 ZNF274 GTRD no Liver (HepG2) 108255234
chr17 38671278 38673420 ZNF274 GTRD no Liver (HepG2) 21754353
chr17 38671671 38675578 ZNF274 GTRD no Liver (HepG2) 21754364
chr17 38671671 38675578 ZNF274 GTRD no Liver (HepG2) 108255235
chr17 38671698 38675547 ZNF274 GTRD no Liver (HepG2) 21754371
chr17 38671698 38675547 ZNF274 GTRD no Liver (HepG2) 108255236
chr17 38671744 38673449 ZNF274 GTRD no Blood (GM12878) 21754380
chr17 38672309 38675388 ZNF274 GTRD no Bone Marrow (K562) 21754418
chr17 38672309 38675388 ZNF274 GTRD no Bone Marrow (K562) 108255237
chr17 38672512 38675353 TCF7L2 GTRD no Colon (HCT116) 21754423
chr17 38672512 38675353 TCF7L2 GTRD no Colon (HCT116) 108255238
chr17 38672624 38675481 TCF7L2 GTRD no Colon (HCT116) 21754425
chr17 38672624 38675481 TCF7L2 GTRD no Colon (HCT116) 108255239
chr17 38672686 38675556 TCF7L2 GTRD no Colon (HCT116) 21754428
chr17 38672686 38675556 TCF7L2 GTRD no Colon (HCT116) 108255240
chr17 38672710 38675503 ZNF274 GTRD no Blood (GM12878) 21754430
chr17 38672710 38675503 ZNF274 GTRD no Blood (GM12878) 108255241
chr17 38672891 38673427 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21754437
chr17 38672897 38673493 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21754438
chr17 38672911 38673473 ZNF274 GTRD no Blood (GM12878) 21754441
chr17 38672975 38673491 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21754448
chr17 38672976 38673488 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21754449
chr17 38672980 38673436 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21754450
chr17 38672987 38673483 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21754452
chr17 38673008 38673439 ZNF274 GTRD no Blood (GM12878) 21754456
chr17 38673008 38673464 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21754457
chr17 38673012 38673488 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21754459
chr17 38673018 38673534 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21754461
chr17 38673018 38673548 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21754462
chr17 38673019 38673409 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21754463
chr17 38673024 38673408 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21754465
chr17 38673029 38675422 TCF7L2 GTRD no Colon (HCT116) 21754466
chr17 38673029 38675422 TCF7L2 GTRD no Colon (HCT116) 108255242
chr17 38673033 38673433 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21754467
chr17 38673041 38673505 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21754471
chr17 38673056 38673412 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21754473
chr17 38673064 38673420 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21754475
chr17 38673064 38673440 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21754476
chr17 38673068 38673418 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21754478
chr17 38673069 38673439 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21754479
chr17 38673071 38673441 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21754481
chr17 38673090 38673750 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21754484
chr17 38673095 38673465 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21754486
chr17 38673101 38673457 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21754488
chr17 38673104 38673500 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21754489
chr17 38673116 38673476 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21754493
chr17 38673117 38673421 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21754494
chr17 38673122 38673486 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21754496
chr17 38673138 38673414 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21754498
chr17 38673154 38673430 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21754500
chr17 38673196 38673456 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21754502
chr17 38673241 38675342 TCF7L2 GTRD no Colon (HCT116) 21754503
chr17 38673241 38675342 TCF7L2 GTRD no Colon (HCT116) 108255243
chr17 38673242 38673506 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21754504
chr17 38673248 38675342 TCF7L2 GTRD no Colon (HCT116) 21754505
chr17 38673248 38675342 TCF7L2 GTRD no Colon (HCT116) 108255244
chr17 38673253 38675474 ZNF274 GTRD no Liver (HepG2) 21754506
chr17 38673253 38675474 ZNF274 GTRD no Liver (HepG2) 108255245
chr17 38673255 38675393 TCF7L2 GTRD no Colon (HCT116) 21754507
chr17 38673255 38675393 TCF7L2 GTRD no Colon (HCT116) 108255246
chr17 38673304 38674878 ZNF274 GTRD no Liver (HepG2) 21754508
chr17 38673304 38674878 ZNF274 GTRD no Liver (HepG2) 108255247
chr17 38673330 38675345 TCF7L2 GTRD no Colon (HCT116) 21754509
chr17 38673330 38675345 TCF7L2 GTRD no Colon (HCT116) 108255248
chr17 38673344 38675300 TCF7L2 GTRD no Colon (HCT116) 21754510
chr17 38673344 38675300 TCF7L2 GTRD no Colon (HCT116) 108255249
Genes associated with rs558949578[chr17:38673400], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More