EnhancerDB
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  3. rs558952602[chr1:45195300]
Enhancers that have rs558952602[chr1:45195300]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 45192844 45199975 enh313
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Stomach Epithelial (MCF-7) Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Placenta Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs558952602[chr1:45195300]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 45195287 45195305 MAFF JASPAR yes 28577932
chr1 45195289 45195300 NRL JASPAR yes 28577933
chr1 45195289 45195304 MAFK JASPAR yes 28577934
chr1 45195298 45195313 FOXA1 JASPAR yes 28577935
chr1 45195299 45195311 FOXI1 JASPAR yes 28577936
chr1 45195299 45195313 POU4F1 JASPAR yes 28577937
chr1 45195299 45195314 FOXP1 JASPAR yes 28577938
chr1 45195299 45195314 HNF1A JASPAR yes 28577939
chr1 45195300 45195312 FOXC2 JASPAR yes 28577940
chr1 45195300 45195314 ONECUT2 JASPAR yes 28577941
chr1 45195300 45195314 ONECUT3 JASPAR yes 28577942
Genes associated with rs558952602[chr1:45195300], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More