EnhancerDB
  1. Home
  2. SNP
  3. rs558960749[chr1:54767713]
Enhancers that have rs558960749[chr1:54767713]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 54761072 54782679 enh11866
Liver (HepG2) Brain (SK-N-SH) Large Intestine Blood (T-cell) Esophagus Astrocyte Bone (Osteoblast) Stomach Placenta Thyroid Uterus Embryonic Stem Cell Line (H1-hESC) Pancreas Spleen Muscle (Myotube) Neural Stem Cells (H9) Thymus Heart
Transcript factors that have rs558960749[chr1:54767713]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 54767698 54767717 CTCF JASPAR yes 28970636
chr1 54767706 54767726 RREB1 JASPAR yes 28970637
chr1 54767708 54767714 SP1 TRANSFAC yes 28970638
chr1 54767709 54767714 SP1 TRANSFAC yes 28970639
chr1 54767711 54767721 SP1 JASPAR yes 28970640
chr1 54767711 54767731 RREB1 JASPAR yes 28970641
chr1 54767712 54767732 RREB1 JASPAR yes 28970642
chr1 54767713 54767733 RREB1 JASPAR yes 28970643
Genes associated with rs558960749[chr1:54767713], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More