EnhancerDB
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  3. rs55896601[chr14:103016227]
Enhancers that have rs55896601[chr14:103016227]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr14 102988165 103029255 enh3463
Bone Marrow (K562) Brain (SK-N-MC) Colon (HCT116) Blood (Karpas-422) Uterus Stomach Epithelial (MCF-7) Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Spleen Muscle (Myotube) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs55896601[chr14:103016227]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr14 103015812 103016647 TCF7L2 GTRD no Colon (HCT116) 21642230
chr14 103015919 103016641 TCF7L2 GTRD no Colon (HCT116) 21642231
chr14 103015940 103016661 ZNF143 GTRD no Epithelial (MCF-7) 21642232
chr14 103015976 103016746 TCF7L2 GTRD no Colon (HCT116) 21642233
chr14 103016080 103016684 TCF7L2 GTRD no Colon (HCT116) 21642234
chr14 103016081 103016607 ZNF143 GTRD no Epithelial (MCF-7) 21642235
chr14 103016168 103016399 ZNF274 GTRD no Bone Marrow (K562) 21642236
chr14 103016225 103016238 NFKB1 JASPAR yes 117911045
chr14 103016225 103016238 NFKB2 JASPAR yes 117911046
Genes associated with rs55896601[chr14:103016227], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More