EnhancerDB
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  3. rs559005414[chr1:223894361]
Enhancers that have rs559005414[chr1:223894361]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 223886085 223931782 enh12712
Bone Marrow (K562) Brain (SK-N-MC) Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs559005414[chr1:223894361]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 223894349 223894363 SPIC JASPAR yes 35670277
chr1 223894356 223894370 GATA2 JASPAR yes 35670278
chr1 223894358 223894366 GATA3 JASPAR yes 35670279
chr1 223894358 223894366 GATA5 JASPAR yes 35670280
Genes associated with rs559005414[chr1:223894361], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More