EnhancerDB
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  3. rs55908424[chr17:49027635]
Enhancers that have rs55908424[chr17:49027635]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 49015225 49039275 enh17224
Bone Marrow (K562) Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs55908424[chr17:49027635]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 49026798 49028431 POLR2A UCSC Txn Factor no Conserved 108271956
chr17 49026798 49028431 POLR2A UCSC Txn Factor no Conserved 108271957
chr17 49027149 49027725 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21771622
chr17 49027149 49027725 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108271959
chr17 49027226 49027766 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108271963
chr17 49027242 49027638 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21771627
chr17 49027242 49027638 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108271965
chr17 49027284 49027814 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21771630
chr17 49027284 49027814 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108271968
chr17 49027286 49027956 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108271969
chr17 49027297 49027813 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21771631
chr17 49027297 49027813 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108271970
chr17 49027352 49027968 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21771633
chr17 49027352 49027968 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108271975
chr17 49027375 49027673 NR3C1 UCSC Txn Factor no Conserved 108271976
chr17 49027489 49028133 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21771634
chr17 49027489 49028133 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108271977
chr17 49027496 49028146 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21771635
chr17 49027496 49028146 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108271978
chr17 49027509 49028165 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108271979
chr17 49027512 49028042 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21771636
chr17 49027570 49027954 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21771637
chr17 49027571 49028111 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108271980
chr17 49027584 49028060 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21771638
chr17 49027591 49028111 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108271981
chr17 49027591 49028147 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21771639
chr17 49027591 49028147 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108271982
chr17 49027592 49028088 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21771640
chr17 49027592 49028088 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108271983
chr17 49027621 49027635 CREB3 JASPAR yes 54738138
chr17 49027621 49027635 CREB3L1 JASPAR yes 54738139
chr17 49027621 49028141 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21771641
chr17 49027621 49028141 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108271984
chr17 49027622 49028158 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108271985
chr17 49027625 49027637 CREB1 JASPAR yes 54738140
chr17 49027625 49027637 FOXC2 JASPAR yes 54738141
chr17 49027634 49027944 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21771642
chr17 49027634 49028150 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21771643
chr17 49027634 49028150 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108271986
Genes associated with rs55908424[chr17:49027635], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More