EnhancerDB
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  3. rs559090797[chr1:172902513]
Enhancers that have rs559090797[chr1:172902513]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 172893305 172912815 enh12378
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Cervix (HeLa-S3) Prostate (RWPE1) Brain (SK-N-MC) Esophagus Astrocyte Brain (SK-N-SH) Stomach Muscle (A673) Placenta Muscle (Myoblast) Spleen Uterus Heart
Transcript factors that have rs559090797[chr1:172902513]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 172901710 172904166 TEF1 GTRD no Bone (Osteoblast) 107846311
chr1 172901853 172904128 ZNF274 GTRD no Cervix (HeLa-S3) 21350584
chr1 172901853 172904128 ZNF274 GTRD no Cervix (HeLa-S3) 107846312
chr1 172901991 172902521 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21350585
chr1 172902063 172902542 ZNF274 GTRD no Cervix (HeLa-S3) 21350586
chr1 172902083 172902599 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21350587
chr1 172902119 172904316 ZNF274 GTRD no Cervix (HeLa-S3) 21350588
chr1 172902119 172904316 ZNF274 GTRD no Cervix (HeLa-S3) 107846313
chr1 172902148 172902633 ZNF274 GTRD no Bone Marrow (K562) 21350589
chr1 172902169 172902568 ZNF274 GTRD no Liver (HepG2) 21350590
chr1 172902182 172902668 ZNF274 GTRD no Liver (HepG2) 21350591
chr1 172902260 172902678 ZNF274 GTRD no Liver (HepG2) 21350592
Genes associated with rs559090797[chr1:172902513], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More