EnhancerDB
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  3. rs559094542[chr1:12602439]
Enhancers that have rs559094542[chr1:12602439]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 12597605 12619763 enh11515
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Lung Heart
Transcript factors that have rs559094542[chr1:12602439]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 12592297 12605478 ZBTB33 GTRD no Lung (A549) 107802124
chr1 12592297 12605478 ZBTB33 GTRD no Lung (A549) 107802125
chr1 12602432 12602444 HES7 JASPAR yes 26831219
chr1 12602433 12602442 SNAI2 JASPAR yes 26831220
chr1 12602433 12602443 HEY2 JASPAR yes 26831221
chr1 12602433 12602443 ID4 JASPAR yes 26831222
chr1 12602433 12602443 TCF4 JASPAR yes 26831223
Genes associated with rs559094542[chr1:12602439], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More