EnhancerDB
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  3. rs559106779[chr2:99082857]
Enhancers that have rs559106779[chr2:99082857]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 99062965 99109835 enh5721
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Lung (A549) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs559106779[chr2:99082857]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 99082849 99082860 GCM1 JASPAR yes 75657695
chr2 99082853 99082868 SCRT1 JASPAR yes 75657696
chr2 99082854 99082864 FIGLA JASPAR yes 75657697
chr2 99082854 99082864 ID4 JASPAR yes 75657698
chr2 99082854 99082864 MSC JASPAR yes 75657699
chr2 99082854 99082864 MYF6 JASPAR yes 75657700
chr2 99082854 99082864 TCF3 JASPAR yes 75657701
chr2 99082854 99082864 TCF4 JASPAR yes 75657702
chr2 99082855 99082864 SNAI2 JASPAR yes 75657703
chr2 99082855 99082868 SCRT2 JASPAR yes 75657704
chr2 99082856 99082861 USF2 TRANSFAC yes 75657705
chr2 99082857 99082863 PTF TRANSFAC yes 75657706
Genes associated with rs559106779[chr2:99082857], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More