EnhancerDB
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  3. rs559116482[chr12:105861241]
Enhancers that have rs559116482[chr12:105861241]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 105835665 105865198 enh29945
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Large Intestine Astrocyte Bone (Osteoblast) Uterus Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Neural Stem Cells (H9) Heart
Transcript factors that have rs559116482[chr12:105861241]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 105859758 105861902 ZNF143 GTRD no Epithelial (MCF-7) 21569902
chr12 105859816 105861956 ZNF143 GTRD no Epithelial (MCF-7) 21569903
chr12 105859922 105861781 ZNF143 GTRD no Epithelial (MCF-7) 21569904
chr12 105859962 105861640 ZNF143 GTRD no Epithelial (MCF-7) 21569905
chr12 105859967 105861836 ZNF143 GTRD no Epithelial (MCF-7) 21569906
chr12 105859981 105861828 ZNF143 GTRD no Epithelial (MCF-7) 21569907
chr12 105860121 105861301 ZNF143 GTRD no Epithelial (MCF-7) 21569908
chr12 105860150 105861737 ZNF143 GTRD no Epithelial (MCF-7) 21569909
chr12 105860166 105861498 ZNF143 GTRD no Epithelial (MCF-7) 21569910
chr12 105860171 105861314 ZNF143 GTRD no Epithelial (MCF-7) 21569911
chr12 105860192 105861309 ZNF143 GTRD no Epithelial (MCF-7) 21569912
chr12 105860193 105861584 ZNF143 GTRD no Epithelial (MCF-7) 21569913
chr12 105860206 105861610 ZNF143 GTRD no Epithelial (MCF-7) 21569914
chr12 105860214 105861643 ZNF143 GTRD no Epithelial (MCF-7) 21569915
chr12 105860231 105861383 ZNF143 GTRD no Epithelial (MCF-7) 21569917
chr12 105860250 105861503 ZNF143 GTRD no Epithelial (MCF-7) 21569920
chr12 105860254 105861301 ZNF143 GTRD no Epithelial (MCF-7) 21569921
chr12 105860270 105861310 ZNF143 GTRD no Epithelial (MCF-7) 21569924
chr12 105860290 105861464 ZNF143 GTRD no Epithelial (MCF-7) 21569927
chr12 105860309 105861335 ZNF143 GTRD no Epithelial (MCF-7) 21569928
chr12 105860327 105861340 ZNF143 GTRD no Epithelial (MCF-7) 21569929
chr12 105860334 105861327 ZNF143 GTRD no Epithelial (MCF-7) 21569930
chr12 105860335 105861283 ZNF143 GTRD no Epithelial (MCF-7) 21569931
chr12 105860360 105861400 ZNF143 GTRD no Epithelial (MCF-7) 21569934
chr12 105860374 105861481 ZNF143 GTRD no Epithelial (MCF-7) 21569936
chr12 105860386 105861431 ZNF143 GTRD no Epithelial (MCF-7) 21569940
chr12 105860532 105861253 SOX2 GTRD no Neural Stem Cells (H9) 21569950
chr12 105860587 105861363 SOX2 GTRD no Neural Stem Cells (H9) 21569952
chr12 105860619 105861307 SOX2 GTRD no Neural Stem Cells (H9) 21569953
chr12 105860694 105861439 ZNF143 GTRD no Epithelial (MCF-7) 21569954
chr12 105861236 105861256 RREB1 JASPAR yes 123446875
chr12 105861238 105861258 RREB1 JASPAR yes 123446876
chr12 105861240 105861260 RREB1 JASPAR yes 123446877
Genes associated with rs559116482[chr12:105861241], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More