EnhancerDB
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  3. rs559117272[chr2:237880623]
Enhancers that have rs559117272[chr2:237880623]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 237871729 237900195 enh34428
Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Cervix (HeLa-S3) Large Intestine Blood (T-cell) Esophagus Astrocyte Lung (PC-9) Bone (Osteoblast) Stomach Thyroid Uterus Muscle (Myoblast) Pancreas Neural Stem Cells (H9) Thymus Heart
chr2 237880182 237880685 vista35360
VISTA
Transcript factors that have rs559117272[chr2:237880623]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 237880618 237880623 SP1 TRANSFAC yes 22239357
chr2 237880618 237880623 SP1 TRANSFAC yes 82071513
chr2 237880618 237880624 SP1 TRANSFAC yes 22239358
chr2 237880618 237880624 SP1 TRANSFAC yes 82071514
chr2 237880618 237880625 SP1 TRANSFAC yes 22239359
chr2 237880618 237880625 SP1 TRANSFAC yes 82071515
chr2 237880623 237880629 SP1 TRANSFAC yes 22239360
chr2 237880623 237880629 SP1 TRANSFAC yes 82071516
chr2 237880623 237880633 SP1 JASPAR yes 22239361
chr2 237880623 237880633 SP1 JASPAR yes 82071517
Genes associated with rs559117272[chr2:237880623], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More