EnhancerDB
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  3. rs559120852[chr1:110420362]
Enhancers that have rs559120852[chr1:110420362]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 110412890 110446635 enh12129
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Adrenal Pancreas Uterus Blood (T-cell) Stomach Ovary Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs559120852[chr1:110420362]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 110419814 110420474 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21328130
chr1 110419814 110420474 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107820473
chr1 110419820 110420485 POLR2A UCSC Txn Factor no Conserved 107820476
chr1 110419870 110420520 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21328135
chr1 110419870 110420520 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107820486
chr1 110419914 110420370 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21328140
chr1 110419914 110420370 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107820492
chr1 110419937 110420401 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21328143
chr1 110419937 110420401 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107820495
chr1 110419966 110420496 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21328146
chr1 110419966 110420496 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107820501
chr1 110419979 110420559 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107820505
chr1 110419989 110420369 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21328150
chr1 110419989 110420369 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107820508
chr1 110420021 110420397 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107820511
chr1 110420034 110420663 CTCF UCSC Txn Factor no Conserved 107820512
chr1 110420036 110420412 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21328152
chr1 110420036 110420412 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107820513
chr1 110420041 110420485 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 107820514
chr1 110420072 110420412 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21328153
chr1 110420072 110420412 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107820515
chr1 110420084 110420484 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21328154
chr1 110420084 110420484 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107820516
chr1 110420086 110420376 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21328155
chr1 110420086 110420376 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107820517
chr1 110420094 110420364 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107820518
chr1 110420106 110420396 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21328157
chr1 110420106 110420396 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107820520
chr1 110420112 110420392 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21328158
chr1 110420112 110420392 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107820521
chr1 110420118 110420362 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107820522
chr1 110420118 110420388 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21328159
chr1 110420118 110420388 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107820523
chr1 110420131 110420411 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21328161
chr1 110420131 110420411 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107820525
chr1 110420132 110420408 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21328162
chr1 110420132 110420408 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107820526
chr1 110420139 110420389 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21328163
chr1 110420139 110420389 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107820527
chr1 110420156 110420386 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21328164
chr1 110420196 110420396 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21328168
Genes associated with rs559120852[chr1:110420362], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More