EnhancerDB
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  3. rs55912494[chr16:85366038]
Enhancers that have rs55912494[chr16:85366038]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 85333005 85372015 enh16866
Bone Marrow (K562) Brain (SK-N-MC) Liver Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs55912494[chr16:85366038]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 85362390 85366591 ZNF143 GTRD no Epithelial (MCF-7) 21723718
chr16 85364849 85366042 ZNF143 GTRD no Epithelial (MCF-7) 21723820
chr16 85365378 85367443 ZBTB33 GTRD no Brain (SK-N-SH) 21723840
chr16 85365722 85366102 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21723843
chr16 85365743 85366073 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21723845
chr16 85365754 85366064 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21723846
chr16 85365768 85366092 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21723847
chr16 85365768 85366717 ZNF274 GTRD no Bone Marrow (K562) 21723848
chr16 85365771 85366047 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21723849
chr16 85365791 85366603 TCF7L2 GTRD no Colon (HCT116) 21723852
chr16 85365796 85366434 ZNF143 GTRD no Epithelial (MCF-7) 21723853
chr16 85365800 85366056 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21723854
chr16 85365807 85366137 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21723855
chr16 85365830 85366397 TCF7L2 GTRD no Colon (HCT116) 21723856
chr16 85365885 85366175 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21723860
chr16 85366036 85366042 MZF1 JASPAR yes 12048994
Genes associated with rs55912494[chr16:85366038], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More