EnhancerDB
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  3. rs559143390[chr11:116722625]
Enhancers that have rs559143390[chr11:116722625]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr11 116719892 116728215 enh29178
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Brain (SK-N-MC) Prostate (RWPE1) Blood (T-cell) Esophagus Astrocyte Bone (Osteoblast) Blood (GM12878) Stomach Muscle (A673) Peripheral Blood (MM.1S) Lung (PC-9) Muscle (Myoblast) Uterus Thymus Heart
chr11 116722234 116722744 vista11673
VISTA
Transcript factors that have rs559143390[chr11:116722625]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr11 116722393 116722669 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21516035
chr11 116722393 116722669 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108000042
chr11 116722419 116722625 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21516036
chr11 116722419 116722625 EBF1 UCSC Txn Factor no Conserved 108000043
chr11 116722419 116722625 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108000044
chr11 116722613 116722625 NHLH1 JASPAR yes 41692465
chr11 116722613 116722625 NHLH1 JASPAR yes 114135884
chr11 116722623 116722637 SPIC JASPAR yes 41692466
chr11 116722623 116722637 SPIC JASPAR yes 114135885
Genes associated with rs559143390[chr11:116722625], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More