EnhancerDB
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  3. rs559204319[chr1:17887935]
Enhancers that have rs559204319[chr1:17887935]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 17883825 17906655 enh11558
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs559204319[chr1:17887935]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 17887926 17887940 GLIS2 JASPAR yes 27101964
chr1 17887926 17887940 ZIC1 JASPAR yes 27101965
chr1 17887926 17887941 ZIC3 JASPAR yes 27101966
chr1 17887926 17887941 ZIC4 JASPAR yes 27101967
Genes associated with rs559204319[chr1:17887935], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More