EnhancerDB
  1. Home
  2. SNP
  3. rs559204541[chr1:25053901]
Enhancers that have rs559204541[chr1:25053901]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 25026945 25066186 enh139
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs559204541[chr1:25053901]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 25053882 25053902 RREB1 JASPAR yes 27523846
chr1 25053897 25053911 POU1F1 JASPAR yes 27523849
Genes associated with rs559204541[chr1:25053901], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More