EnhancerDB
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  3. rs559213243[chr1:23703311]
Enhancers that have rs559213243[chr1:23703311]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 23696605 23707075 enh11609
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Prostate (RWPE1) Lung (PC-9) Esophagus Astrocyte Bone (Osteoblast) Stomach Placenta Colon (HCT116) Thyroid Muscle (Myoblast) Breast Pancreas (Panc1) Uterus Epithelial (MCF-7)
Transcript factors that have rs559213243[chr1:23703311]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 23703306 23703327 IRF1 JASPAR yes 27430458
chr1 23703308 23703329 IRF1 JASPAR yes 27430459
chr1 23703309 23703313 YY1 TRANSFAC yes 27430460
chr1 23703309 23703330 IRF1 JASPAR yes 27430461
chr1 23703310 23703325 FOXP1 JASPAR yes 27430462
chr1 23703310 23703331 IRF1 JASPAR yes 27430463
chr1 23703311 23703326 FOXP1 JASPAR yes 27430464
chr1 23703311 23703332 IRF1 JASPAR yes 27430465
Genes associated with rs559213243[chr1:23703311], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More