EnhancerDB
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  3. rs559236115[chr3:57974543]
Enhancers that have rs559236115[chr3:57974543]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 57952365 57980395 enh7247
Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs559236115[chr3:57974543]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 57974531 57974543 FOXC2 JASPAR yes 2661477
chr3 57974537 57974549 MEF2A JASPAR yes 2661478
chr3 57974537 57974549 MEF2B JASPAR yes 2661479
chr3 57974537 57974549 MEF2D JASPAR yes 2661480
chr3 57974539 57974550 CDX2 JASPAR yes 2661481
chr3 57974540 57974551 HOXA10 JASPAR yes 2661482
chr3 57974541 57974550 CDX1 JASPAR yes 2661483
chr3 57974541 57974551 HOXA13 JASPAR yes 2661484
chr3 57974541 57974551 HOXD13 JASPAR yes 2661485
chr3 57974542 57974553 PROP1 JASPAR yes 2661486
Genes associated with rs559236115[chr3:57974543], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More