EnhancerDB
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  3. rs55924540[chr12:46951016]
Enhancers that have rs55924540[chr12:46951016]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 46935165 46958895 enh14680
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Uterus Blood (T-cell) Kidney Epithelial (MCF-7) Skin (Keratinocyte) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Breast Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs55924540[chr12:46951016]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 46949896 46951227 ZBTB33 GTRD no Brain (SK-N-SH) 108027949
chr12 46950110 46951192 AR GTRD no Prostate (PC-3) 21542546
chr12 46950110 46951192 AR GTRD no Prostate (PC-3) 108028011
chr12 46950564 46951080 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21542552
chr12 46950605 46951069 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21542553
chr12 46950659 46951168 ZNF143 GTRD no Epithelial (MCF-7) 21542559
chr12 46950790 46951047 ZNF143 GTRD no Epithelial (MCF-7) 21542565
chr12 46950795 46951121 ZNF274 GTRD no Bone Marrow (K562) 21542566
chr12 46950836 46951352 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21542567
chr12 46950927 46951291 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21542568
chr12 46950935 46951305 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21542569
chr12 46950936 46951192 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21542570
chr12 46950970 46951246 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21542571
chr12 46950979 46951259 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21542572
chr12 46950994 46951250 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21542573
Genes associated with rs55924540[chr12:46951016], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More