EnhancerDB
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  3. rs559272340[chr1:52108594]
Enhancers that have rs559272340[chr1:52108594]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 52099919 52117655 enh11848
Bone Marrow (K562) Liver Colon (HCT116) Adrenal Uterus Stomach Brain (SK-N-SH) Ovary Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs559272340[chr1:52108594]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 52108589 52108605 SOX8 JASPAR yes 28858548
Genes associated with rs559272340[chr1:52108594], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More