EnhancerDB
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  3. rs559275138[chr12:53254041]
Enhancers that have rs559275138[chr12:53254041]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 53249369 53285465 enh14733
Bone Marrow (K562) Astrocyte Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
chr12 53253974 53254173 vista13487
VISTA
Transcript factors that have rs559275138[chr12:53254041]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 53250910 53254386 ZNF274 GTRD no Cervix (HeLa-S3) 21547338
chr12 53250910 53254386 ZNF274 GTRD no Cervix (HeLa-S3) 108034364
chr12 53251478 53254359 ZNF143 GTRD no Epithelial (MCF-7) 21547477
chr12 53251478 53254359 ZNF143 GTRD no Epithelial (MCF-7) 108034365
chr12 53251505 53254273 ZNF143 GTRD no Epithelial (MCF-7) 21547483
chr12 53251505 53254273 ZNF143 GTRD no Epithelial (MCF-7) 108034366
chr12 53253844 53254185 ZNF274 GTRD no Bone Marrow (K562) 21547548
chr12 53253844 53254185 ZNF274 GTRD no Bone Marrow (K562) 108034367
chr12 53253895 53254225 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21547549
chr12 53253895 53254225 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108034368
Genes associated with rs559275138[chr12:53254041], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More