EnhancerDB
  1. Home
  2. SNP
  3. rs559290082[chr6:86112173]
Enhancers that have rs559290082[chr6:86112173]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 86109285 86118699 enh23394
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Blood (T-cell) Stomach Skin (Keratinocyte) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs559290082[chr6:86112173]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 86112158 86112173 HNF4A JASPAR yes 103251752
chr6 86112163 86112174 ESRRB JASPAR yes 103251754
chr6 86112165 86112180 HNF4A JASPAR yes 103251755
chr6 86112173 86112177 H4TF2 TRANSFAC yes 103251756
Genes associated with rs559290082[chr6:86112173], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More