EnhancerDB
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  3. rs559333462[chr1:178619545]
Enhancers that have rs559333462[chr1:178619545]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 178606845 178636895 enh759
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Large Intestine Ovary Esophagus Astrocyte Blood (OCI-LY7) Stomach Placenta Blood (Karpas-422) Lung (PC-9) Spleen Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs559333462[chr1:178619545]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 178619531 178619549 TP53 JASPAR yes 33433509
chr1 178619532 178619547 TP53 JASPAR yes 33433510
chr1 178619532 178619552 TP53 JASPAR yes 33433511
chr1 178619545 178619813 ZNF143 GTRD no Epithelial (MCF-7) 21352789
Genes associated with rs559333462[chr1:178619545], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More