EnhancerDB
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  3. rs559333953[chr17:55487154]
Enhancers that have rs559333953[chr17:55487154]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 55477469 55505815 enh4487
Brain (SK-N-MC) Blood (Karpas-422) Pancreas Uterus Stomach Brain (SK-N-SH) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Blood (GM12878) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs559333953[chr17:55487154]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 55487145 55487160 JUND JASPAR yes 54951986
chr17 55487146 55487159 JUN JASPAR yes 54951987
chr17 55487149 55487162 NR2F1 JASPAR yes 54951988
chr17 55487150 55487158 CREB1 JASPAR yes 54951989
chr17 55487151 55487169 RARA JASPAR yes 54951990
chr17 55487153 55487157 ESR1 TRANSFAC yes 54951991
Genes associated with rs559333953[chr17:55487154], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More