EnhancerDB
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  3. rs559354721[chr16:14397999]
Enhancers that have rs559354721[chr16:14397999]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 14391425 14410135 enh3904
Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Stomach Epithelial (MCF-7) Skin (Keratinocyte) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1)
chr16 14397958 14398068 vista21961
VISTA
Transcript factors that have rs559354721[chr16:14397999]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 14397411 14398061 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21692266
chr16 14397411 14398061 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108183965
chr16 14397411 14398061 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108183966
chr16 14397481 14398151 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21692269
chr16 14397481 14398151 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108183971
chr16 14397481 14398151 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108183972
chr16 14397510 14398052 ZBTB33 GTRD no Lung (A549) 108183973
chr16 14397510 14398052 ZBTB33 GTRD no Lung (A549) 108183974
chr16 14397523 14398043 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21692272
chr16 14397523 14398043 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108183976
chr16 14397629 14398165 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108183977
chr16 14397676 14398112 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108183978
chr16 14397742 14398142 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108183979
chr16 14397775 14398145 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108183980
chr16 14397884 14398128 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108183981
chr16 14397891 14400270 TCF7L2 GTRD no Colon (HCT116) 21692274
chr16 14397891 14400270 TCF7L2 GTRD no Colon (HCT116) 108183982
chr16 14397899 14401114 ZNF274 GTRD no Liver (HepG2) 21692275
chr16 14397899 14401114 ZNF274 GTRD no Liver (HepG2) 108183983
chr16 14397905 14398345 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 21692276
chr16 14397905 14398345 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 108183984
chr16 14397959 14400764 ZBTB33 GTRD no Lung (A549) 108183985
chr16 14397969 14398295 TCF7L2 GTRD no Colon (HCT116) 21692277
chr16 14397969 14398295 TCF7L2 GTRD no Colon (HCT116) 108183986
chr16 14397979 14400111 P63 GTRD no Skin (Keratinocyte) 21692278
chr16 14397979 14400111 P63 GTRD no Skin (Keratinocyte) 108183987
chr16 14397993 14398007 GLIS2 JASPAR yes 9680808
chr16 14397993 14398007 GLIS2 JASPAR yes 49346668
chr16 14397996 14398001 SP1 TRANSFAC yes 9680809
chr16 14397996 14398001 SP1 TRANSFAC yes 49346669
chr16 14397996 14398002 SP1 TRANSFAC yes 9680810
chr16 14397996 14398002 SP1 TRANSFAC yes 49346670
chr16 14397996 14398006 SP1 JASPAR yes 9680811
chr16 14397996 14398006 SP1 JASPAR yes 49346671
chr16 14397997 14398007 ZNF740 JASPAR yes 9680812
chr16 14397997 14398007 ZNF740 JASPAR yes 49346672
chr16 14397999 14398020 ZNF263 JASPAR yes 9680813
chr16 14397999 14398020 ZNF263 JASPAR yes 49346673
Genes associated with rs559354721[chr16:14397999], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More