EnhancerDB
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  3. rs55935950[chr6:25169277]
Enhancers that have rs55935950[chr6:25169277]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 25163505 25184315 enh23129
Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs55935950[chr6:25169277]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 25169266 25169287 IRF1 JASPAR yes 100830731
chr6 25169267 25169288 IRF1 JASPAR yes 100830732
chr6 25169271 25169286 FOXP1 JASPAR yes 100830734
chr6 25169271 25169292 IRF1 JASPAR yes 100830735
chr6 25169272 25169287 FOXP1 JASPAR yes 100830736
chr6 25169273 25169288 FOXP1 JASPAR yes 100830737
chr6 25169273 25169294 IRF1 JASPAR yes 100830738
chr6 25169274 25169289 FOXP1 JASPAR yes 100830739
chr6 25169274 25169295 IRF1 JASPAR yes 100830740
chr6 25169275 25169290 FOXP1 JASPAR yes 100830741
chr6 25169277 25169292 FOXP1 JASPAR yes 100830742
Genes associated with rs55935950[chr6:25169277], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More