EnhancerDB
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  3. rs559389318[chr15:56335023]
Enhancers that have rs559389318[chr15:56335023]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr15 56329348 56341835 enh16155
Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Skin (Keratinocyte) Lung (A549) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673)
Transcript factors that have rs559389318[chr15:56335023]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr15 56334745 56335185 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21654824
chr15 56334757 56335141 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21654825
chr15 56334777 56335097 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21654826
chr15 56334779 56335119 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21654827
chr15 56334787 56335117 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21654828
chr15 56334787 56335257 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21654829
chr15 56334846 56335130 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 21654830
chr15 56334874 56335138 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21654831
chr15 56335021 56335036 IRF9 JASPAR yes 23522538
Genes associated with rs559389318[chr15:56335023], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More