EnhancerDB
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  3. rs559408739[chr1:178021861]
Enhancers that have rs559408739[chr1:178021861]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 178015665 178033840 enh12406
Prostate (PC-3) Liver (HepG2) Brain (SK-N-MC) Large Intestine Lung (PC-9) Esophagus Astrocyte Lung Stomach Muscle (A673) Placenta Colon (HCT116) Uterus Peripheral Blood (MM.1S) Muscle (Myoblast) Pancreas Pancreas (Panc1) Neural Stem Cells (H9) Heart
Transcript factors that have rs559408739[chr1:178021861]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 178021581 178022535 ZNF274 GTRD no Liver (HepG2) 21352344
chr1 178021610 178023866 ZNF274 GTRD no Liver (HepG2) 21352345
chr1 178021618 178022758 ZNF274 GTRD no Liver (HepG2) 21352346
chr1 178021642 178022000 ZNF274 GTRD no Liver (HepG2) 21352347
chr1 178021710 178022620 ZNF274 GTRD no Liver (HepG2) 21352348
chr1 178021716 178022434 ZNF274 GTRD no Liver (HepG2) 21352349
chr1 178021724 178022624 ZNF274 GTRD no Liver (HepG2) 21352350
chr1 178021727 178022003 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21352351
chr1 178021731 178022904 ZNF274 GTRD no Liver (HepG2) 21352352
chr1 178021784 178022635 ZNF274 GTRD no Liver (HepG2) 21352353
chr1 178021786 178022582 ZNF274 GTRD no Liver (HepG2) 21352354
chr1 178021799 178022545 ZNF274 GTRD no Liver (HepG2) 21352355
chr1 178021800 178022411 ZNF274 GTRD no Liver (HepG2) 21352356
chr1 178021801 178022824 ZNF274 GTRD no Liver (HepG2) 21352357
chr1 178021814 178022460 ZNF274 GTRD no Liver (HepG2) 21352358
chr1 178021846 178022406 ZNF274 GTRD no Liver (HepG2) 21352359
chr1 178021853 178021865 PKNOX1 JASPAR yes 33389734
chr1 178021853 178021865 PKNOX2 JASPAR yes 33389735
chr1 178021853 178021865 TGIF1 JASPAR yes 33389736
chr1 178021853 178021865 TGIF2 JASPAR yes 33389737
Genes associated with rs559408739[chr1:178021861], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More