EnhancerDB
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  3. rs559439593[chr2:38940477]
Enhancers that have rs559439593[chr2:38940477]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 38916069 38955355 enh5435
Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Ovary Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs559439593[chr2:38940477]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 38940463 38940481 NFYA JASPAR yes 73168709
chr2 38940466 38940482 NFYA JASPAR yes 73168710
chr2 38940469 38940484 NFYB JASPAR yes 73168711
Genes associated with rs559439593[chr2:38940477], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More