EnhancerDB
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  3. rs559442161[chr17:25823322]
Enhancers that have rs559442161[chr17:25823322]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 25791425 25838215 enh17063
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Pancreas Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Bone (Osteoblast) Lung (A549) Thyroid Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs559442161[chr17:25823322]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 25823317 25823327 ALX3 JASPAR yes 53637119
chr17 25823317 25823327 GSX1 JASPAR yes 53637120
chr17 25823317 25823327 GSX2 JASPAR yes 53637121
chr17 25823317 25823327 HOXB2 JASPAR yes 53637122
chr17 25823317 25823327 HOXB3 JASPAR yes 53637123
chr17 25823317 25823327 MEOX2 JASPAR yes 53637124
chr17 25823317 25823327 MIXL1 JASPAR yes 53637125
chr17 25823317 25823327 MNX1 JASPAR yes 53637126
chr17 25823318 25823326 DLX6 JASPAR yes 53637127
chr17 25823318 25823326 EN1 JASPAR yes 53637128
chr17 25823318 25823326 LBX1 JASPAR yes 53637129
chr17 25823318 25823326 PAX4 JASPAR yes 53637130
chr17 25823318 25823326 PDX1 JASPAR yes 53637131
chr17 25823318 25823326 VAX1 JASPAR yes 53637132
chr17 25823318 25823326 VAX2 JASPAR yes 53637133
chr17 25823318 25823326 VSX1 JASPAR yes 53637134
chr17 25823318 25823326 VSX2 JASPAR yes 53637135
Genes associated with rs559442161[chr17:25823322], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More