EnhancerDB
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  3. rs559462628[chr12:64309812]
Enhancers that have rs559462628[chr12:64309812]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 64304505 64318541 enh14780
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Thyroid Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs559462628[chr12:64309812]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 64309791 64309812 IRF1 JASPAR yes 121377849
chr12 64309796 64309817 IRF1 JASPAR yes 121377852
chr12 64309797 64309812 FOXP1 JASPAR yes 121377853
chr12 64309797 64309818 IRF1 JASPAR yes 121377854
chr12 64309798 64309813 STAT2 JASPAR yes 121377855
chr12 64309801 64309822 IRF1 JASPAR yes 121377856
chr12 64309802 64309817 FOXP1 JASPAR yes 121377857
chr12 64309802 64309823 IRF1 JASPAR yes 121377858
chr12 64309806 64309827 IRF1 JASPAR yes 121377859
chr12 64309807 64309822 FOXP1 JASPAR yes 121377860
chr12 64309807 64309828 IRF1 JASPAR yes 121377861
chr12 64309808 64309829 IRF1 JASPAR yes 121377862
chr12 64309809 64309824 FOXP1 JASPAR yes 121377863
chr12 64309809 64309830 IRF1 JASPAR yes 121377864
chr12 64309810 64309831 IRF1 JASPAR yes 121377865
chr12 64309811 64309826 FOXP1 JASPAR yes 121377866
chr12 64309812 64309827 FOXP1 JASPAR yes 121377867
Genes associated with rs559462628[chr12:64309812], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More