EnhancerDB
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  3. rs55946456[chr1:178624356]
Enhancers that have rs55946456[chr1:178624356]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 178606845 178636895 enh759
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Large Intestine Ovary Esophagus Astrocyte Blood (OCI-LY7) Stomach Placenta Blood (Karpas-422) Lung (PC-9) Spleen Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs55946456[chr1:178624356]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 178624343 178624361 NR3C1 JASPAR yes 33434214
chr1 178624349 178624356 NKX3-1 JASPAR yes 33434215
chr1 178624352 178624362 HMBOX1 JASPAR yes 33434216
chr1 178624354 178624357 MYB TRANSFAC yes 33434217
Genes associated with rs55946456[chr1:178624356], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More