EnhancerDB
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  3. rs55946756[chr5:153577099]
Enhancers that have rs55946756[chr5:153577099]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 153567505 153585038 enh38530
Bone Marrow (K562) Prostate (PC-3) Prostate (RWPE1) Lung (PC-9) Esophagus Astrocyte Bone (Osteoblast) Blood (GM12878) Stomach Thyroid Peripheral Blood (MM.1S) Uterus Pancreas (Panc1) Muscle (Myoblast) Breast Spleen Muscle (Myotube) Neural Stem Cells (H9) Blood (T-cell) Heart
chr5 153575907 153577964 vista1380
VISTA
Transcript factors that have rs55946756[chr5:153577099]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 153576743 153577324 GATA1 UCSC Txn Factor no Conserved 107693838
chr5 153576782 153577532 GATA2 UCSC Txn Factor no Conserved 107693839
chr5 153576824 153577281 MYC UCSC Txn Factor no Conserved 107693840
chr5 153576854 153577506 CTCF UCSC Txn Factor no Conserved 107693841
chr5 153576877 153577233 MAX UCSC Txn Factor no Conserved 107693842
chr5 153576959 153577224 RAD21 UCSC Txn Factor no Conserved 107693843
chr5 153576961 153577183 TEAD4 UCSC Txn Factor no Conserved 107693844
chr5 153576963 153577207 TAL1 UCSC Txn Factor no Conserved 107693845
chr5 153577083 153577102 CTCF JASPAR yes 67015221
chr5 153577083 153577102 CTCF JASPAR yes 111950836
Genes associated with rs55946756[chr5:153577099], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More