EnhancerDB
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  3. rs559475173[chr1:33226200]
Enhancers that have rs559475173[chr1:33226200]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 33221045 33231075 enh11728
Bone Marrow (K562) Liver Astrocyte Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Stomach Epithelial (MCF-7) Skin (Keratinocyte) Ovary Thyroid Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Liver (HepG2) Muscle (A673)
Transcript factors that have rs559475173[chr1:33226200]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 33226183 33226204 IRF1 JASPAR yes 28006502
chr1 33226184 33226205 IRF1 JASPAR yes 28006504
chr1 33226185 33226200 STAT2 JASPAR yes 28006506
chr1 33226186 33226201 FOXP1 JASPAR yes 28006507
chr1 33226188 33226203 FOXP1 JASPAR yes 28006508
chr1 33226188 33226209 IRF1 JASPAR yes 28006509
chr1 33226189 33226204 FOXP1 JASPAR yes 28006510
chr1 33226189 33226209 RREB1 JASPAR yes 28006511
chr1 33226189 33226210 IRF1 JASPAR yes 28006512
chr1 33226190 33226205 FOXP1 JASPAR yes 28006513
chr1 33226191 33226206 FOXP1 JASPAR yes 28006514
chr1 33226192 33226207 FOXP1 JASPAR yes 28006515
chr1 33226193 33226208 FOXP1 JASPAR yes 28006516
chr1 33226194 33226209 FOXP1 JASPAR yes 28006517
Genes associated with rs559475173[chr1:33226200], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More