EnhancerDB
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Enhancers that have rs559487250[chr17:79339889]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 79326745 79343235 enh32378
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Large Intestine Esophagus Astrocyte Stomach Muscle (A673) Thyroid Pancreas Pancreas (Panc1) Uterus Thymus Heart
chr17 79339701 79340108 vista26400
VISTA
Transcript factors that have rs559487250[chr17:79339889]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 79339397 79339947 TCF7L2 UCSC Txn Factor no Conserved 108309168
chr17 79339513 79339889 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21797897
chr17 79339513 79339889 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108309171
chr17 79339518 79339988 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 21797898
chr17 79339518 79339988 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 108309172
chr17 79339545 79339892 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 21797901
chr17 79339545 79339892 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 108309175
chr17 79339598 79339908 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108309181
chr17 79339646 79339910 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108309185
chr17 79339682 79339946 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108309186
chr17 79339688 79339908 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108309187
chr17 79339877 79339892 RUNX2 JASPAR yes 21318289
chr17 79339877 79339892 RUNX2 JASPAR yes 56320648
Genes associated with rs559487250[chr17:79339889], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More