EnhancerDB
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  3. rs55954719[chr1:244323224]
Enhancers that have rs55954719[chr1:244323224]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 244321045 244330039 enh12845
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Astrocyte Bone (Osteoblast) Muscle (A673) Placenta Pancreas (Panc1) Uterus Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Neural Stem Cells (H9) Heart
Transcript factors that have rs55954719[chr1:244323224]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 244321962 244323694 ZNF274 GTRD no Cervix (HeLa-S3) 21404957
chr1 244322062 244323964 ZNF274 GTRD no Cervix (HeLa-S3) 21404958
chr1 244322496 244323638 ZNF274 GTRD no Cervix (HeLa-S3) 21404961
chr1 244322571 244323675 ZNF274 GTRD no Cervix (HeLa-S3) 21404962
chr1 244322576 244323652 ZNF274 GTRD no Cervix (HeLa-S3) 21404963
chr1 244322619 244323455 ZNF274 GTRD no Cervix (HeLa-S3) 21404964
chr1 244322619 244323705 ZNF274 GTRD no Cervix (HeLa-S3) 21404965
chr1 244322635 244323533 ZNF274 GTRD no Cervix (HeLa-S3) 21404966
chr1 244322780 244323448 ZNF274 GTRD no Cervix (HeLa-S3) 21404967
chr1 244322817 244323508 ZNF274 GTRD no Cervix (HeLa-S3) 21404968
chr1 244322829 244323413 TEF1 GTRD no Bone (Osteoblast) 21404969
chr1 244322831 244323566 ZNF274 GTRD no Cervix (HeLa-S3) 21404970
chr1 244322840 244323473 ZNF274 GTRD no Cervix (HeLa-S3) 21404971
chr1 244322857 244323430 TEF1 GTRD no Bone (Osteoblast) 21404972
chr1 244323217 244323233 GLIS1 JASPAR yes 36715648
Genes associated with rs55954719[chr1:244323224], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More