EnhancerDB
  1. Home
  2. SNP
  3. rs559562927[chr15:40364127]
Enhancers that have rs559562927[chr15:40364127]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr15 40353665 40379655 enh16061
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs559562927[chr15:40364127]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr15 40363461 40364951 TCF7L2 GTRD no Colon (HCT116) 21649872
chr15 40363484 40364618 TCF7L2 GTRD no Colon (HCT116) 21649873
chr15 40363543 40364197 TCF7L2 GTRD no Colon (HCT116) 21649874
chr15 40364109 40364127 RARA JASPAR yes 22926442
chr15 40364116 40364620 ZNF274 GTRD no Bone Marrow (K562) 21649876
chr15 40364119 40364133 PLAG1 JASPAR yes 22926445
Genes associated with rs559562927[chr15:40364127], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More