EnhancerDB
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  3. rs559564516[chr4:7970245]
Enhancers that have rs559564516[chr4:7970245]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr4 7955942 7984080 enh21353
Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Spleen Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs559564516[chr4:7970245]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr4 7970243 7970255 HES5 JASPAR yes 88148915
chr4 7970243 7970255 HES7 JASPAR yes 88148916
chr4 7970243 7970255 PKNOX1 JASPAR yes 88148917
chr4 7970243 7970255 PKNOX2 JASPAR yes 88148918
chr4 7970243 7970255 TGIF1 JASPAR yes 88148919
chr4 7970243 7970255 TGIF2 JASPAR yes 88148920
chr4 7970245 7970265 TP63 JASPAR yes 88148921
Genes associated with rs559564516[chr4:7970245], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More