EnhancerDB
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  3. rs559564773[chr12:96808228]
Enhancers that have rs559564773[chr12:96808228]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 96795782 96855361 enh14922
Brain (SK-N-MC) Astrocyte Colon (HCT116) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Breast Spleen Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs559564773[chr12:96808228]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 96808222 96808228 GATA3 JASPAR yes 123067465
chr12 96808226 96808241 FOXP1 JASPAR yes 123067466
chr12 96808227 96808242 FOXP1 JASPAR yes 123067467
chr12 96808228 96808243 FOXP1 JASPAR yes 123067468
chr12 96808228 96808249 IRF1 JASPAR yes 123067469
Genes associated with rs559564773[chr12:96808228], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More