EnhancerDB
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  3. rs55958748[chr1:201431611]
Enhancers that have rs55958748[chr1:201431611]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 201414985 201433510 enh875
Brain (SK-N-MC) Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs55958748[chr1:201431611]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 201428969 201431998 ZNF143 GTRD no Epithelial (MCF-7) 21364083
chr1 201428969 201431998 ZNF143 GTRD no Epithelial (MCF-7) 107856210
chr1 201430736 201431969 ZNF143 GTRD no Epithelial (MCF-7) 21364137
chr1 201430736 201431969 ZNF143 GTRD no Epithelial (MCF-7) 107856221
chr1 201431058 201431682 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107856257
chr1 201431324 201431971 ZNF143 GTRD no Epithelial (MCF-7) 21364180
Genes associated with rs55958748[chr1:201431611], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More