EnhancerDB
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  3. rs559598562[chr1:52021023]
Enhancers that have rs559598562[chr1:52021023]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 52012725 52027215 enh11846
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Astrocyte Bone (Osteoblast) Stomach Placenta Peripheral Blood (MM.1S) Lung (PC-9) Muscle (Myoblast) Pancreas (Panc1) Muscle (Myotube) Neural Stem Cells (H9) Thymus Epithelial (MCF-7)
Transcript factors that have rs559598562[chr1:52021023]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 52021015 52021024 HIC2 JASPAR yes 28849970
chr1 52021016 52021032 ZNF143 JASPAR yes 28849971
chr1 52021017 52021027 SP1 JASPAR yes 28849972
chr1 52021017 52021037 ESR1 JASPAR yes 28849973
chr1 52021018 52021038 TP63 JASPAR yes 28849975
Genes associated with rs559598562[chr1:52021023], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More