EnhancerDB
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  3. rs559612732[chr17:62689331]
Enhancers that have rs559612732[chr17:62689331]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 62688405 62713087 enh17300
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs559612732[chr17:62689331]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 62687737 62691399 ZNF143 GTRD no Epithelial (MCF-7) 21778957
chr17 62687749 62691357 TCF7L2 GTRD no Colon (HCT116) 21778958
chr17 62687783 62691374 ZNF143 GTRD no Epithelial (MCF-7) 21778959
chr17 62687797 62691593 ZNF143 GTRD no Epithelial (MCF-7) 21778960
chr17 62687810 62695569 ZNF143 GTRD no Epithelial (MCF-7) 21778961
chr17 62687873 62694535 ZNF143 GTRD no Epithelial (MCF-7) 21778963
chr17 62687878 62695454 ZNF143 GTRD no Epithelial (MCF-7) 21778964
chr17 62687993 62695445 ZNF143 GTRD no Epithelial (MCF-7) 21778965
chr17 62688394 62691502 TCF7L2 GTRD no Colon (HCT116) 21778973
chr17 62688432 62689798 ZNF143 GTRD no Epithelial (MCF-7) 21778974
chr17 62688476 62690874 TCF7L2 GTRD no Colon (HCT116) 21778975
chr17 62688562 62689354 TCF7L2 GTRD no Colon (HCT116) 21778976
chr17 62688634 62689485 ZNF143 GTRD no Epithelial (MCF-7) 21778977
chr17 62689319 62689340 IRF1 JASPAR yes 55312417
chr17 62689321 62689336 PRDM1 JASPAR yes 55312418
chr17 62689321 62689336 STAT2 JASPAR yes 55312419
chr17 62689323 62689337 IRF7 JASPAR yes 55312420
chr17 62689323 62689344 IRF1 JASPAR yes 55312421
chr17 62689327 62689347 RREB1 JASPAR yes 55312422
chr17 62689330 62689336 TCF4 TRANSFAC yes 55312423
chr17 62689330 62689342 FOXI1 JASPAR yes 55312424
chr17 62689330 62689345 FOXP1 JASPAR yes 55312425
chr17 62689330 62689350 RREB1 JASPAR yes 55312426
chr17 62689331 62689351 RREB1 JASPAR yes 55312427
Genes associated with rs559612732[chr17:62689331], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More