EnhancerDB
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  3. rs55965563[chr1:25050829]
Enhancers that have rs55965563[chr1:25050829]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 25026945 25066186 enh139
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs55965563[chr1:25050829]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 25049960 25051595 ZNF274 GTRD no Blood (GM12878) 107802464
chr1 25050816 25050834 ESR2 JASPAR yes 27523358
chr1 25050818 25050833 ESR2 JASPAR yes 27523359
Genes associated with rs55965563[chr1:25050829], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More