EnhancerDB
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  3. rs559676306[chr1:209568582]
Enhancers that have rs559676306[chr1:209568582]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 209568193 209597635 enh12617
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Lung (A549) Placenta Colon (HCT116) Uterus Thyroid Peripheral Blood (MM.1S) Lung (PC-9) Breast Spleen Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs559676306[chr1:209568582]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 209568562 209568583 IRF1 JASPAR yes 34970743
chr1 209568567 209568582 FOXP1 JASPAR yes 34970745
chr1 209568567 209568588 IRF1 JASPAR yes 34970746
chr1 209568568 209568583 FOXP1 JASPAR yes 34970747
chr1 209568571 209568586 PRDM1 JASPAR yes 34970748
chr1 209568571 209568586 STAT2 JASPAR yes 34970749
chr1 209568573 209568594 IRF1 JASPAR yes 34970750
Genes associated with rs559676306[chr1:209568582], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More